rs535396050 chr10:38529230 A>C
- Sequence
tcgaatgtaatggaatggattgga[A/C]tggactagaaaggaattgaaagga
- ASB in cell types
- MCF7 (Invasive ductal breast carcinoma) GM12878 (female B-cells lymphoblastoid cell line) K562 (myelogenous leukemia) HepG2 (hepatoblastoma)
- ASB for transcription factors
- CTCF_HUMAN FOXK2_HUMAN IKZF2_HUMAN CTBP1_HUMAN
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-log10 FDR of Ref (A) ASB
-log10 FDR of Alt (C) ASB
Details
Transcription factors
Cell types
Uniprot ID | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | Motif fold change | Motif concordance | |
|---|---|---|---|---|---|---|---|---|
| CTCF_HUMAN | 1.99 | -0.59 | 3.00 | n/a | No Hit | |||
| FOXK2_HUMAN | 3.19 | n/a | 3.00 | n/a | n/a | |||
| IKZF2_HUMAN | 3.79 | n/a | 3.00 | n/a | n/a | |||
| CTBP1_HUMAN | 3.06 | n/a | 3.00 | n/a | n/a | |||
| MTA2_HUMAN | 2.87 | n/a | 3.00 | n/a | n/a |
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