rs539771 chr1:160844630 A>C

Sequence
gcctaaaatagcctgctggagaat[A/C]agatatcacatgatacagagataa
ASB for transcription factors
MEF2D_HUMAN MITF_HUMAN

Color scale

color scale ref
-log10 FDR of Ref (A) ASB
color scale alt
-log10 FDR of Alt (C) ASB

Details

Uniprot ID
Effect size Ref
Effect size Alt
FDR Ref
FDR Alt
Mean BAD
Motif fold change
Motif concordance
MEF2D_HUMAN 2.40 n/a 0.041.00 3.00 n/a No Hit
MITF_HUMAN 2.04 -4.71 0.051.00 2.00 n/a No Hit
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Motif analysis

No data available

Genetic associations

GTEx eQTL Artery_Coronary Artery_Tibial Cells_Cultured_fibroblasts Colon_Transverse Heart_Left_Ventricle Lung Muscle_Skeletal Nerve_Tibial Skin_Not_Sun_Exposed_Suprapubic Skin_Sun_Exposed_Lower_leg Testis Thyroid Whole_Blood

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