rs540868867 chr15:26891574 A>C
- Sequence
cctcgtgcatcgaggggaagactg[A/C]caggagggcattctagagcttggt
- ASB in cell types
- GM19239 (male B-cells lymphoblastoid cell line)
- ASB for transcription factors
- STAG1_HUMAN CTCF_HUMAN
View in PheLiGe Color scale
-log10 FDR of Ref (A) ASB
-log10 FDR of Alt (C) ASB
Details
Transcription factors
Cell types
Uniprot ID | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | Motif fold change | Motif concordance | |
|---|---|---|---|---|---|---|---|---|
| STAG1_HUMAN | 1.28 | -0.28 | 1.17 | n/a | n/a | |||
| CTCF_HUMAN | 1.13 | 0.19 | 1.31 | n/a | No Hit |
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