rs549609438 chr1:43172585 C>A
- Sequence
ccgggggaggggaaaggggaggga[C/A]aaggggaggggaaaggggagggac
- ASB in cell types
- K562 (myelogenous leukemia)
- ASB for transcription factors
- GABP1_HUMAN SP2_HUMAN
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-log10 FDR of Ref (C) ASB
-log10 FDR of Alt (A) ASB
Details
Transcription factors
Cell types
Uniprot ID | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | Motif fold change | Motif concordance | |
|---|---|---|---|---|---|---|---|---|
| GABP1_HUMAN | 2.08 | -1.89 | 1.00 | n/a | n/a | |||
| SP2_HUMAN | 2.82 | -5.34 | 2.00 | -2.86 | Concordant |
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Motif analysis
