rs550297 chr1:170146015 G>A

Sequence
agaggggactggtttaaaatgaca[G/A]tctcaagttcatttagaaagagaa
ASB in cell types
iPS-derived chondrocytes
ASB for transcription factors
RARA_HUMAN

Color scale

color scale ref
-log10 FDR of Ref (G) ASB
color scale alt
-log10 FDR of Alt (A) ASB

Details

Uniprot ID
Effect size Ref
Effect size Alt
FDR Ref
FDR Alt
Mean BAD
Motif fold change
Motif concordance
RARA_HUMAN 0.85 0.58 0.020.94 1.00 n/a No Hit
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Motif analysis

No data available

Genetic associations

GRASP ldl cholesterol waist hip ratio
GTEx eQTL Adrenal_Gland Artery_Aorta Artery_Coronary Artery_Tibial Cells_Cultured_fibroblasts Esophagus_Mucosa Esophagus_Muscularis Liver Muscle_Skeletal Skin_Not_Sun_Exposed_Suprapubic Skin_Sun_Exposed_Lower_leg

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