rs556528648 chr6:294786 G>T

Sequence
cacagggtgtgtatgtgtgtgggg[G/T]tgagagagagaacaaacacaaggt
ASB in cell types
GM12878 (female B-cells lymphoblastoid cell line)
ASB for transcription factors
ENL_HUMAN STAG1_HUMAN IKZF2_HUMAN

Color scale

color scale ref
-log10 FDR of Ref (G) ASB
color scale alt
-log10 FDR of Alt (T) ASB

Details

Uniprot ID
Effect size Ref
Effect size Alt
FDR Ref
FDR Alt
Mean BAD
Motif fold change
Motif concordance
ENL_HUMAN 1.86 n/a 3.5·10-61.00 2.00 n/a n/a
STAG1_HUMAN 2.71 -1.91 0.011.00 2.00 n/a n/a
IKZF2_HUMAN 1.38 -3.12 0.041.00 2.00 n/a n/a
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Motif analysis

No data available

Genetic associations

No data available

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