rs55733342 chr13:46382826 C>T
- Sequence
tgggattacaggcatgagccaccg[C/T]gcctggcctatccatgcttatctt
- ASB in cell types
- GM12878 (female B-cells lymphoblastoid cell line)
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-log10 FDR of Ref (C) ASB
-log10 FDR of Alt (T) ASB
Details
Transcription factors
Cell types
Cell type | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | |
|---|---|---|---|---|---|---|
| GM12878 (female B-cells lymphoblastoid cell line) | 0.43 | 0.82 | 1.02 |
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Motif analysis
No data available
Genetic associations
GTEx eQTL Brain_Cortex, Brain_Spinal_cord_cervical_c-1, Esophagus_Gastroesophageal_Junction, Nerve_Tibial, Skin_Sun_Exposed_Lower_leg, Thyroid