rs55775623 chr1:9436457 A>G
- Sequence
tcttatcatgcctggaatgtagtt[A/G]ttgatttacaccttgtaaatttct
- ASB in cell types
- LNCaP (prostate carcinoma) upper lobe of left lung primary prostate cancer
- ASB for transcription factors
- FOXA1_HUMAN EP300_HUMAN TLE3_HUMAN
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-log10 FDR of Ref (A) ASB
-log10 FDR of Alt (G) ASB
Details
Transcription factors
Cell types
Uniprot ID | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | Motif fold change | Motif concordance | |
|---|---|---|---|---|---|---|---|---|
| FOXA1_HUMAN | 1.96 | 1.69 | 1.53 | n/a | No Hit | |||
| EP300_HUMAN | -1.63 | 2.07 | 1.67 | n/a | n/a | |||
| TLE3_HUMAN | -3.54 | 1.98 | 1.50 | n/a | n/a |
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