rs55895669 chr21:36389830 A>G
- Sequence
cgcacgctgatttgtagagggaaa[A/G]gtggggagcaggagcgccacctgg
- ASB in cell types
- K562 (myelogenous leukemia) GM12878 (female B-cells lymphoblastoid cell line) GM18486 (Lymphoblastoid Cell Lines) GM12892 (female B-cells lymphoblastoid cell line)
- ASB for transcription factors
- STAG1_HUMAN KAISO_HUMAN MGAP_HUMAN T2FA_HUMAN
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-log10 FDR of Ref (A) ASB
-log10 FDR of Alt (G) ASB
Details
Transcription factors
Cell types
Uniprot ID | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | Motif fold change | Motif concordance | |
|---|---|---|---|---|---|---|---|---|
| STAG1_HUMAN | 2.53 | -1.43 | 1.11 | n/a | n/a | |||
| KAISO_HUMAN | n/a | 1.62 | 2.00 | n/a | No Hit | |||
| MGAP_HUMAN | 2.48 | -2.16 | 1.00 | n/a | n/a | |||
| T2FA_HUMAN | 2.62 | -2.34 | 1.00 | n/a | n/a |
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