rs55991733 chr1:236489940 C>G
- Sequence
ttacattgttagggcttacatggt[C/G]ctgggatttcccaccagtactcaa
- ASB in cell types
- foreskin keratinocyte GM12878 (female B-cells lymphoblastoid cell line) HEK293 (embryonic kidney) sigmoid colon
- ASB for transcription factors
- RAD51_HUMAN CTCF_HUMAN
View in PheLiGe Color scale
-log10 FDR of Ref (C) ASB
-log10 FDR of Alt (G) ASB
Details
Transcription factors
Cell types
Uniprot ID | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | Motif fold change | Motif concordance | |
|---|---|---|---|---|---|---|---|---|
| RAD51_HUMAN | 2.54 | -0.71 | 2.25 | n/a | n/a | |||
| CTCF_HUMAN | 1.31 | 0.63 | 1.27 | n/a | No Hit |
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