rs56017750 chr1:80250964 G>T
- Sequence
agtgtacttacgcagacctagagg[G/T]tatagactattactcatccagact
- ASB in cell types
- HEK293 (embryonic kidney) HEK293T (embryonic kidney) embryonic kidney
- ASB for transcription factors
- FOXA1_HUMAN SCRT1_HUMAN ZN843_HUMAN GCR_HUMAN
View in PheLiGe Color scale
-log10 FDR of Ref (G) ASB
-log10 FDR of Alt (T) ASB
Details
Transcription factors
Cell types
Uniprot ID | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | Motif fold change | Motif concordance | |
|---|---|---|---|---|---|---|---|---|
| FOXA1_HUMAN | -0.11 | 1.30 | 1.67 | n/a | No Hit | |||
| SCRT1_HUMAN | n/a | 2.35 | 2.00 | n/a | n/a | |||
| ZN843_HUMAN | n/a | 2.36 | 2.00 | n/a | n/a | |||
| GCR_HUMAN | -0.80 | 1.59 | 2.00 | n/a | No Hit |
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