ADASTRA v5.1.3
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rs56118269
chr12:98503586
C
>
T
Sequence
ccccgacggggaggtgtgtagctg[C/T]acttttttggcgacagttattatt
ASB in cell types
K562 (myelogenous leukemia)
BeWo (gestational choriocarcinoma)
HCASMC (Human coronary artery smooth muscle cells)
HepG2 (hepatoblastoma)
ASB for transcription factors
TAL1_HUMAN
TCF21_HUMAN
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View in UCSC Genome Browser
View in PheLiGe
0.05
FDR threshold
0
ES threshold
Color scale
-log10 FDR of Ref (
C
) ASB
-log10 FDR of Alt (
T
) ASB
Details
Transcription factors
Cell types
Effect size Ref
(+6 others)
Selected columns
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Uniprot ID
Effect size Ref
Effect size Alt
FDR Ref
FDR Alt
Mean BAD
Motif fold change
Motif concordance
TAL1_HUMAN
n/a
2.62
1.00
0.03
2.00
n/a
No Hit
TCF21_HUMAN
1.30
n/a
0.03
1.00
3.00
n/a
n/a
Items per page:
5
1 – 2 of 2
Motif analysis
No data available
Genetic associations
GTEx eQTL
Adrenal_Gland
,
Cells_Cultured_fibroblasts
,
Colon_Transverse
,
Pancreas
,
Spleen
,
Stomach
,
Whole_Blood
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Generated by ADASTRA database
2022.05.19 v5.1.3 Bill Cipher
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SNP set annotation with ANANASTRA
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+/-100bp
log2-scale
log2(Alt/Ref motif p-value)