rs56134691 chr18:74242401 G>T
- Sequence
actccaaccagaaacattttagct[G/T]ctctaaatcacatctgtgaattct
- ASB in cell types
- GM12878 (female B-cells lymphoblastoid cell line) adult erythroblasts
- ASB for transcription factors
- CTCF_HUMAN RBBP5_HUMAN
View in PheLiGe Color scale
-log10 FDR of Ref (G) ASB
-log10 FDR of Alt (T) ASB
Details
Transcription factors
Cell types
Uniprot ID | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | Motif fold change | Motif concordance | |
|---|---|---|---|---|---|---|---|---|
| CTCF_HUMAN | 0.24 | 1.16 | 1.33 | n/a | No Hit | |||
| RBBP5_HUMAN | 2.19 | n/a | 2.00 | n/a | n/a |
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Motif analysis
No data available
Genetic associations
GTEx eQTL Artery_Aorta, Artery_Tibial, Brain_Cerebellar_Hemisphere, Brain_Cerebellum, Cells_Cultured_fibroblasts, Esophagus_Mucosa, Heart_Left_Ventricle, Lung, Muscle_Skeletal, Spleen