rs56161141 chr2:58448269 A>G
- Sequence
gctcatccttcacaacgtggaaac[A/G]gcgcctcctcccataggccttccc
- ASB in cell types
- MM1.S (plasma cell myeloma) MS-1 (Small cell lung carcinoma) SYO-1(Biphasic synovial sarcoma) EOL-1 (Acute myeloid leukemia)
- ASB for transcription factors
- CTCF_HUMAN REST_HUMAN
View in PheLiGe Color scale
-log10 FDR of Ref (A) ASB
-log10 FDR of Alt (G) ASB
Details
Transcription factors
Cell types
Uniprot ID | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | Motif fold change | Motif concordance | |
|---|---|---|---|---|---|---|---|---|
| CTCF_HUMAN | 1.55 | 0.29 | 1.34 | n/a | No Hit | |||
| REST_HUMAN | 2.05 | n/a | 2.00 | n/a | No Hit |
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