rs56200810 chr9:7536577 A>C
- Sequence
acttggctgattgatcagggtggc[A/C]gcaggaggctcagcggcccaacat
- ASB in cell types
- WA01 (H1, human embryonic stem cells) SK-N-SH (neuroblastoma) AG09319 (fibroblasts) 697 (B acute lymphoblastic leukemia with t(1;19)(q23;p13.3) E2A-PBX1 (TCF3-PBX1))
- ASB for transcription factors
- CTCF_HUMAN
View in PheLiGe Color scale
-log10 FDR of Ref (A) ASB
-log10 FDR of Alt (C) ASB
Details
Transcription factors
Cell types
Uniprot ID | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | Motif fold change | Motif concordance | |
|---|---|---|---|---|---|---|---|---|
| CTCF_HUMAN | 1.02 | 0.52 | 1.32 | -3.19 | Concordant |
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Motif analysis
