rs56233006 chr1:2003636 G>C

Sequence
ttcatatgggacggagttctgcct[G/C]gggggcgggggtcaaacccttcca
ASB for transcription factors
RFX1_HUMAN

Color scale

color scale ref
-log10 FDR of Ref (G) ASB
color scale alt
-log10 FDR of Alt (C) ASB

Details

Uniprot ID
Effect size Ref
Effect size Alt
FDR Ref
FDR Alt
Mean BAD
Motif fold change
Motif concordance
RFX1_HUMAN 0.90 -0.67 0.021.00 1.00 -1.38 Weak Concordant
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Motif analysis

RFX1_HUMAN Weak Concordant
RFX1_HUMAN pic

Genetic associations

GTEx eQTL Skin_Not_Sun_Exposed_Suprapubic Skin_Sun_Exposed_Lower_leg Testis Whole_Blood

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