rs56315318 chr17:1587292 C>A
- Sequence
gcgggtagcgtgatggggaagtgg[C/A]gggcatgcggaagacctggtgcaa
- ASB in cell types
- monocytes from periferal blood upper lobe of left lung macrophages form periferal blood
- ASB for transcription factors
- SRBP2_HUMAN SPI1_HUMAN EP300_HUMAN MNT_HUMAN
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-log10 FDR of Ref (C) ASB
-log10 FDR of Alt (A) ASB
Details
Transcription factors
Cell types
Uniprot ID | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | Motif fold change | Motif concordance | |
|---|---|---|---|---|---|---|---|---|
| SRBP2_HUMAN | 3.04 | n/a | 2.67 | n/a | No Hit | |||
| SPI1_HUMAN | 1.52 | 0.70 | 2.71 | 0.80 | Weak Discordant | |||
| EP300_HUMAN | 2.18 | -0.46 | 1.50 | n/a | n/a | |||
| MNT_HUMAN | -0.98 | 1.91 | 1.00 | n/a | n/a |
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Motif analysis
