rs56321811 chr12:54411590 T>C
- Sequence
ctggcctcccagaattgtgggtga[T/C]tcaggggaaatgagagccacatgt
- ASB in cell types
- MDM(monocyte derived macrophages) CD14+ monocytes
- ASB for transcription factors
- SPI1_HUMAN STAT1_HUMAN TEAD4_HUMAN
View in PheLiGe Color scale
-log10 FDR of Ref (T) ASB
-log10 FDR of Alt (C) ASB
Details
Transcription factors
Cell types
Uniprot ID | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | Motif fold change | Motif concordance | |
|---|---|---|---|---|---|---|---|---|
| SPI1_HUMAN | 2.07 | -0.21 | 1.50 | 0.20 | Weak Discordant | |||
| STAT1_HUMAN | 1.43 | 0.55 | 3.00 | -0.88 | Weak Concordant | |||
| TEAD4_HUMAN | -1.93 | 2.29 | 1.00 | n/a | No Hit |
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Motif analysis
