rs569103010 chr10:38529235 C>G
- Sequence
tgtaatggaatggattggaatgga[C/G]tagaaaggaattgaaaggaatgga
- ASB in cell types
- MCF7 (Invasive ductal breast carcinoma) GM12878 (female B-cells lymphoblastoid cell line) HepG2 (hepatoblastoma) K562 (myelogenous leukemia)
- ASB for transcription factors
- CTCF_HUMAN FOXK2_HUMAN EP300_HUMAN IKZF2_HUMAN
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-log10 FDR of Ref (C) ASB
-log10 FDR of Alt (G) ASB
Details
Transcription factors
Cell types
Uniprot ID | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | Motif fold change | Motif concordance | |
|---|---|---|---|---|---|---|---|---|
| CTCF_HUMAN | 2.13 | -2.16 | 3.57 | n/a | No Hit | |||
| FOXK2_HUMAN | 3.17 | n/a | 3.00 | n/a | n/a | |||
| EP300_HUMAN | 2.31 | -0.55 | 3.00 | n/a | n/a | |||
| IKZF2_HUMAN | 3.44 | n/a | 3.00 | n/a | n/a | |||
| CTBP1_HUMAN | 3.06 | n/a | 3.00 | n/a | n/a |
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