rs573995 chr1:28235345 T>G
- Sequence
gttataatttgggttttctttttt[T/G]tttttttgttttgagacggagtct
- ASB in cell types
- K562 (myelogenous leukemia) HEK293 (embryonic kidney) GM12878 (female B-cells lymphoblastoid cell line)
- ASB for transcription factors
- ZNF24_HUMAN ENL_HUMAN NFIC_HUMAN ATF4_HUMAN
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-log10 FDR of Ref (T) ASB
-log10 FDR of Alt (G) ASB
Details
Transcription factors
Cell types
Uniprot ID | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | Motif fold change | Motif concordance | |
|---|---|---|---|---|---|---|---|---|
| ZNF24_HUMAN | -0.72 | 1.95 | 1.20 | n/a | n/a | |||
| ENL_HUMAN | -1.39 | 2.41 | 1.00 | n/a | n/a | |||
| NFIC_HUMAN | -2.22 | 2.55 | 1.00 | n/a | No Hit | |||
| ATF4_HUMAN | -3.43 | 2.37 | 1.50 | n/a | No Hit | |||
| ZN394_HUMAN | n/a | 3.51 | 2.00 | -2.18 | Discordant |
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Motif analysis
