rs5756667 chr22:37401687 G>C

Sequence
ctgggggccaccgccctaggaggc[G/C]cgtgaggtttcccagtaaccaagc
ASB in cell types
HEK293 (embryonic kidney)
ASB for transcription factors
PRDM4_HUMAN OSR2_HUMAN
Search SNPs nearby
View in UCSC Genome Browser
View in PheLiGe

Color scale

color scale ref
-log10 FDR of Ref (G) ASB
color scale alt
-log10 FDR of Alt (C) ASB

Details

Uniprot ID
Effect size Ref
Effect size Alt
FDR Ref
FDR Alt
Mean BAD
Motif fold change
Motif concordance
PRDM4_HUMAN 2.85 n/a 3.0·10-31.00 2.00 n/a n/a
OSR2_HUMAN 2.60 -1.82 0.051.00 2.00 n/a No Hit
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Motif analysis

No data available

Genetic associations

GTEx eQTL Cells_Cultured_fibroblasts,  Colon_Sigmoid,  Lung,  Pancreas,  Skin_Not_Sun_Exposed_Suprapubic,  Skin_Sun_Exposed_Lower_leg,  Stomach

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