rs5756668 chr22:37401688 C>G

Sequence
tgggggccaccgccctaggaggcg[C/G]gtgaggtttcccagtaaccaagcc
ASB in cell types
HEK293 (embryonic kidney)
ASB for transcription factors
PRDM4_HUMAN OSR2_HUMAN
Search SNPs nearby
View in UCSC Genome Browser
View in PheLiGe

Color scale

color scale ref
-log10 FDR of Ref (C) ASB
color scale alt
-log10 FDR of Alt (G) ASB

Details

Uniprot ID
Effect size Ref
Effect size Alt
FDR Ref
FDR Alt
Mean BAD
Motif fold change
Motif concordance
PRDM4_HUMAN 2.81 n/a 3.9·10-31.00 2.00 n/a n/a
OSR2_HUMAN 2.60 -1.82 0.051.00 2.00 n/a No Hit
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Motif analysis

No data available

Genetic associations

GTEx eQTL Cells_Cultured_fibroblasts,  Colon_Sigmoid,  Lung,  Pancreas,  Skin_Not_Sun_Exposed_Suprapubic,  Skin_Sun_Exposed_Lower_leg,  Stomach

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