ADASTRA v5.1.3
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rs5756982
chr22:38230550
G
>
T
Sequence
cagcttcggggggtgggtgctggg[G/T]gcctggggtgcctcataggaaagg
ASB in cell types
LNCaP (prostate carcinoma)
GM10847 (female B-cells Lymphoblastoid Cell Lines)
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View in UCSC Genome Browser
View in PheLiGe
0.05
FDR threshold
0
ES threshold
Color scale
-log10 FDR of Ref (
G
) ASB
-log10 FDR of Alt (
T
) ASB
Details
Transcription factors
Cell types
Effect size Ref
(+4 others)
Selected columns
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Cell type
Effect size Ref
Effect size Alt
FDR Ref
FDR Alt
Mean BAD
LNCaP (prostate carcinoma)
-0.36
1.73
1.00
0.05
1.00
GM10847 (female B-cells Lymphoblastoid Cell Lines)
1.67
-0.42
0.05
1.00
1.00
Items per page:
5
1 – 2 of 2
Motif analysis
No data available
Genetic associations
GRASP
advanced age-related macular degeneration (choroidal neovascularization) vs. no amd
,
serum creatinine
,
triglycerides
GTEx eQTL
Adipose_Subcutaneous
,
Nerve_Tibial
,
Thyroid
,
Whole_Blood
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Generated by ADASTRA database
2022.05.19 v5.1.3 Bill Cipher
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SNP set annotation with ANANASTRA
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+/-100bp
log2-scale