rs5758092 chr22:40819179 A>G

Sequence
tataacccgttgcggcccgggcgt[A/G]aagaccccgtctcaccacggctcc
ASB for transcription factors
CTCF_HUMAN
Search SNPs nearby
View in UCSC Genome Browser
View in PheLiGe

Color scale

color scale ref
-log10 FDR of Ref (A) ASB
color scale alt
-log10 FDR of Alt (G) ASB

Details

Uniprot ID
Effect size Ref
Effect size Alt
FDR Ref
FDR Alt
Mean BAD
Motif fold change
Motif concordance
CTCF_HUMAN 0.97 0.05 1.3·10-31.00 1.25 n/a No Hit
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Motif analysis

No data available

Genetic associations

GRASP 2 hour glucose,  chronic kidney disease,  homa-ir,  infant head circumference,  ldl cholesterol
GTEx eQTL Cells_Cultured_fibroblasts,  Lung,  Muscle_Skeletal,  Nerve_Tibial

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