rs5760628 chr22:24768993 A>G
- Sequence
tctgtgcctgggacaaagagccgc[A/G]aggtggtgctattgtcttaggtta
- ASB in cell types
- ID00014 (lymphoblastoid cell, DiGeorge syndrome) GM02610 (Lymphoblastoid Cell Lines) MS-1 (Small cell lung carcinoma) human astrocytes from spinal cord
- ASB for transcription factors
- STAG1_HUMAN
View in PheLiGe Color scale
-log10 FDR of Ref (A) ASB
-log10 FDR of Alt (G) ASB
Details
Transcription factors
Cell types
Uniprot ID | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | Motif fold change | Motif concordance | |
|---|---|---|---|---|---|---|---|---|
| STAG1_HUMAN | 0.95 | -0.10 | 1.67 | n/a | n/a |
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