rs5761858 chr22:26949425 C>T
- Sequence
ccacccaggagctgtccgtggttc[C/T]gaaacctttgtgttggcattgtgg
- ASB in cell types
- GM12878 (female B-cells lymphoblastoid cell line)
- ASB for transcription factors
- REST_HUMAN
View in PheLiGe Color scale
-log10 FDR of Ref (C) ASB
-log10 FDR of Alt (T) ASB
Details
Transcription factors
Cell types
Uniprot ID | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | Motif fold change | Motif concordance | |
|---|---|---|---|---|---|---|---|---|
| REST_HUMAN | -3.25 | 2.10 | 1.78 | 6.12 | Concordant |
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Motif analysis
