rs5762809 chr22:28800506 C>T
- Sequence
gggtcccgtcggccgggttcggcg[C/T]ggctgccaccaccaccatagctcc
- ASB in cell types
- CD14+ monocytes upper lobe of left lung breast tumor monocytes from periferal blood
- ASB for transcription factors
- STAT1_HUMAN ESR1_HUMAN ANDR_HUMAN
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-log10 FDR of Ref (C) ASB
-log10 FDR of Alt (T) ASB
Details
Transcription factors
Cell types
Uniprot ID | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | Motif fold change | Motif concordance | |
|---|---|---|---|---|---|---|---|---|
| STAT1_HUMAN | 2.67 | -0.59 | 3.00 | n/a | No Hit | |||
| ESR1_HUMAN | 2.81 | n/a | 2.00 | n/a | No Hit | |||
| ANDR_HUMAN | 2.40 | n/a | 4.00 | n/a | No Hit |
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Motif analysis
No data available
Genetic associations
GTEx eQTL Adipose_Subcutaneous, Artery_Aorta, Artery_Tibial, Cells_Cultured_fibroblasts, Esophagus_Muscularis, Lung, Muscle_Skeletal, Pancreas, Thyroid