rs5765168 chr22:45102306 G>A

Sequence
cacaattgtacatagagcaccagc[G/A]tacccaggtataaagaaagaaata
ASB in cell types
LNCaP C4-2B (prostate carcinoma)
ASB for transcription factors
CTCF_HUMAN

Color scale

color scale ref
-log10 FDR of Ref (G) ASB
color scale alt
-log10 FDR of Alt (A) ASB

Details

Uniprot ID
Effect size Ref
Effect size Alt
FDR Ref
FDR Alt
Mean BAD
Motif fold change
Motif concordance
CTCF_HUMAN 0.60 1.67 0.900.02 1.06 n/a No Hit
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Motif analysis

No data available

Genetic associations

GRASP advanced age-related macular degeneration (geographic atrophy) schizophrenia
GTEx eQTL Adipose_Subcutaneous Brain_Cortex Cells_Cultured_fibroblasts Esophagus_Mucosa Pancreas Skin_Not_Sun_Exposed_Suprapubic Skin_Sun_Exposed_Lower_leg

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