rs5765171 chr22:45105695 A>T

Sequence
tacacgccacaccatggatgaatc[A/T]tgaacacaagatgctaagtggaag
ASB in cell types
MCF10A (breast epithelial cells) MCF7 (Invasive ductal breast carcinoma)
ASB for transcription factors
CEBPB_HUMAN MNT_HUMAN TEAD4_HUMAN

Color scale

color scale ref
-log10 FDR of Ref (A) ASB
color scale alt
-log10 FDR of Alt (T) ASB

Details

Uniprot ID
Effect size Ref
Effect size Alt
FDR Ref
FDR Alt
Mean BAD
Motif fold change
Motif concordance
CEBPB_HUMAN 1.26 -0.26 9.5·10-31.00 1.50 n/a No Hit
MNT_HUMAN 2.33 -1.93 0.041.00 1.00 n/a n/a
TEAD4_HUMAN 1.55 -1.55 0.041.00 1.00 n/a No Hit
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Motif analysis

No data available

Genetic associations

GRASP adiponectin levels fasting blood glucose hdl cholesterol years of education
GTEx eQTL Adipose_Subcutaneous Cells_Cultured_fibroblasts Skin_Not_Sun_Exposed_Suprapubic Skin_Sun_Exposed_Lower_leg

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