rs5768823 chr22:46488591 G>A
- Sequence
aaaaagaacaaacgcaccccccgc[G/A]ccacagtggaaagtccccagaagc
- ASB in cell types
- GM12878 (female B-cells lymphoblastoid cell line)
- ASB for transcription factors
- BHE40_HUMAN MEF2B_HUMAN COT1_HUMAN IKZF1_HUMAN
View in PheLiGe Color scale
-log10 FDR of Ref (G) ASB
-log10 FDR of Alt (A) ASB
Details
Transcription factors
Cell types
Uniprot ID | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | Motif fold change | Motif concordance | |
|---|---|---|---|---|---|---|---|---|
| BHE40_HUMAN | 1.45 | n/a | 2.00 | n/a | No Hit | |||
| MEF2B_HUMAN | 3.04 | n/a | 1.33 | n/a | No Hit | |||
| COT1_HUMAN | 2.66 | n/a | 1.33 | n/a | No Hit | |||
| IKZF1_HUMAN | 1.63 | -1.08 | 1.42 | n/a | No Hit |
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