rs5771080 chr22:50147099 G>A

Sequence
tcactggggtgcagagggctcttt[G/A]ggggcagagcgggcactgcatgga
ASB in cell types
foreskin keratinocyte
Search SNPs nearby
View in UCSC Genome Browser
View in PheLiGe

Color scale

color scale ref
-log10 FDR of Ref (G) ASB
color scale alt
-log10 FDR of Alt (A) ASB

Details

Cell type
Effect size Ref
Effect size Alt
FDR Ref
FDR Alt
Mean BAD
foreskin keratinocyte 1.93 n/a 4.1·10-61.00 2.11
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Motif analysis

No data available

Genetic associations

GRASP acute lung injury following major trauma,  total cholesterol
GTEx eQTL Adipose_Subcutaneous,  Adipose_Visceral_Omentum,  Artery_Aorta,  Esophagus_Mucosa,  Esophagus_Muscularis,  Heart_Atrial_Appendage,  Nerve_Tibial,  Ovary,  Testis,  Thyroid

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