rs57728824 chr9:109120160 G>C
- Sequence
ggtctatatcttcctggagggggg[G/C]ggggggggaagctcctttcactca
- ASB in cell types
- BEAS-2B (bronchial epithelium) HepG2 (hepatoblastoma) MOLT-4 (Adult T acute lymphoblastic leukemia) GM12878 (female B-cells lymphoblastoid cell line)
- ASB for transcription factors
- RBM25_HUMAN GCR_HUMAN ZN143_HUMAN CDK9_HUMAN
View in PheLiGe Color scale
-log10 FDR of Ref (G) ASB
-log10 FDR of Alt (C) ASB
Details
Transcription factors
Cell types
Uniprot ID | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | Motif fold change | Motif concordance | |
|---|---|---|---|---|---|---|---|---|
| RBM25_HUMAN | 3.42 | n/a | 1.50 | n/a | n/a | |||
| GCR_HUMAN | 1.49 | -0.36 | 1.00 | n/a | No Hit | |||
| ZN143_HUMAN | 0.45 | -0.45 | 1.00 | n/a | No Hit | |||
| CDK9_HUMAN | 2.58 | -1.65 | 1.00 | n/a | n/a | |||
| GATA1_HUMAN | -1.47 | 2.24 | 2.00 | n/a | No Hit |
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