rs58364947 chr7:70829239 C>G
- Sequence
gggttagcgtggctgaggcacccc[C/G]gcaaccaaggcttgggcgatggtg
- ASB in cell types
- glioblastoma patient-derived cell model glioblastoma cells MCF7 (Invasive ductal breast carcinoma) GM12891 (male B- cells lymphoblastoid cell line)
- ASB for transcription factors
- CTCF_HUMAN STAG1_HUMAN
View in PheLiGe Color scale
-log10 FDR of Ref (C) ASB
-log10 FDR of Alt (G) ASB
Details
Transcription factors
Cell types
Uniprot ID | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | Motif fold change | Motif concordance | |
|---|---|---|---|---|---|---|---|---|
| CTCF_HUMAN | 0.44 | 1.61 | 1.38 | n/a | No Hit | |||
| STAG1_HUMAN | -0.02 | 1.75 | 1.17 | n/a | n/a |
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