rs58603818 chr1:44731001 C>T
- Sequence
aaatgttcaaacaaaatgttgtct[C/T]acacctcgcaacaaacacacaact
- ASB in cell types
- MV-4-11 (Childhood acute monocytic leukemia) HEK293 (embryonic kidney) K562 (myelogenous leukemia) HeLa-LTR-Luciferase cells
- ASB for transcription factors
- BRD4_HUMAN ILF3_HUMAN DLX1_HUMAN MAF_HUMAN
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-log10 FDR of Ref (C) ASB
-log10 FDR of Alt (T) ASB
Details
Transcription factors
Cell types
Uniprot ID | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | Motif fold change | Motif concordance | |
|---|---|---|---|---|---|---|---|---|
| BRD4_HUMAN | 2.13 | 0.11 | 1.42 | n/a | n/a | |||
| ILF3_HUMAN | 0.79 | -0.73 | 1.00 | n/a | n/a | |||
| DLX1_HUMAN | 1.70 | -1.31 | 1.00 | n/a | n/a | |||
| MAF_HUMAN | 1.89 | n/a | 2.50 | n/a | No Hit | |||
| NCOA1_HUMAN | 0.89 | -0.49 | 1.00 | n/a | n/a |
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Motif analysis
No data available
Genetic associations
GTEx eQTL Adipose_Subcutaneous, Adipose_Visceral_Omentum, Artery_Tibial, Brain_Nucleus_accumbens_basal_ganglia, Brain_Putamen_basal_ganglia, Cells_Cultured_fibroblasts, Colon_Sigmoid, Esophagus_Mucosa, Esophagus_Muscularis, Lung, Muscle_Skeletal, Nerve_Tibial, Pancreas, Skin_Not_Sun_Exposed_Suprapubic, Skin_Sun_Exposed_Lower_leg, Stomach, Testis, Thyroid