rs58659845 chr2:52440303 G>A
- Sequence
atcctttctctgcccctttgagat[G/A]taaatcttctcccaaatacttgcc
- ASB in cell types
- HS-ES-2M (Epithelioid sarcoma) MDA-MB-231 (breast adenocarcinoma)
- ASB for transcription factors
- GATA3_HUMAN SMRC1_HUMAN
View in PheLiGe Color scale
-log10 FDR of Ref (G) ASB
-log10 FDR of Alt (A) ASB
Details
Transcription factors
Cell types
Uniprot ID | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | Motif fold change | Motif concordance | |
|---|---|---|---|---|---|---|---|---|
| GATA3_HUMAN | -3.65 | 2.98 | 2.00 | n/a | No Hit | |||
| SMRC1_HUMAN | -2.66 | 2.57 | 1.00 | n/a | n/a |
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