rs58701215 chr14:95726229 G>C
- Sequence
tgttcaacctcaaggcagaagatg[G/C]tgttacaccctgagaaacaggctg
- ASB in cell types
- GM02610 (Lymphoblastoid Cell Lines) 2588 (Lymphoblastoid Cell Lines) GM19240 (B cells Lymphoblastoid Cell Lines) GM19238 (female B-cells lymphoblastoid cell lines)
- ASB for transcription factors
- CTCF_HUMAN STAG1_HUMAN
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-log10 FDR of Ref (G) ASB
-log10 FDR of Alt (C) ASB
Details
Transcription factors
Cell types
Uniprot ID | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | Motif fold change | Motif concordance | |
|---|---|---|---|---|---|---|---|---|
| CTCF_HUMAN | 3.78 | -4.02 | 3.00 | -2.54 | Concordant | |||
| STAG1_HUMAN | 2.59 | -0.72 | 2.00 | n/a | n/a |
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Motif analysis
