rs587657104 chr19:54133831 C>T
- Sequence
cctctccacctcccctctctctct[C/T]cctccctctctccacctcccctct
- ASB in cell types
- HepG2 (hepatoblastoma) WA09 (embryonic stem cells)
- ASB for transcription factors
- JUN_HUMAN CREB1_HUMAN TGIF2_HUMAN TP53B_HUMAN
View in PheLiGe Color scale
-log10 FDR of Ref (C) ASB
-log10 FDR of Alt (T) ASB
Details
Transcription factors
Cell types
Uniprot ID | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | Motif fold change | Motif concordance | |
|---|---|---|---|---|---|---|---|---|
| JUN_HUMAN | 1.80 | -1.78 | 1.00 | n/a | No Hit | |||
| CREB1_HUMAN | 1.88 | -1.85 | 1.17 | n/a | No Hit | |||
| TGIF2_HUMAN | 2.46 | -2.49 | 1.00 | n/a | n/a | |||
| TP53B_HUMAN | 2.30 | -1.98 | 1.00 | n/a | n/a |
Items per page:
1 – 4 of 4