rs58777975 chr19:53537988 G>A
- Sequence
gctatgtatcgggggtctgtgtac[G/A]ctcacatacgtgtcggggtctggg
- ASB in cell types
- HepG2 (hepatoblastoma) HEK293 (embryonic kidney)
- ASB for transcription factors
- CREB1_HUMAN TBX3_HUMAN ZN777_HUMAN
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-log10 FDR of Ref (G) ASB
-log10 FDR of Alt (A) ASB
Details
Transcription factors
Cell types
Uniprot ID | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | Motif fold change | Motif concordance | |
|---|---|---|---|---|---|---|---|---|
| CREB1_HUMAN | 3.69 | -3.83 | 1.00 | n/a | No Hit | |||
| TBX3_HUMAN | 3.21 | -3.35 | 1.00 | n/a | No Hit | |||
| ZN777_HUMAN | n/a | 3.37 | 2.00 | n/a | n/a |
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Motif analysis
No data available
Genetic associations
GTEx eQTL Adipose_Subcutaneous, Brain_Cerebellar_Hemisphere, Brain_Cerebellum, Colon_Sigmoid, Esophagus_Muscularis, Nerve_Tibial, Skin_Not_Sun_Exposed_Suprapubic