rs59094105 chr6:122789828 G>T
- Sequence
ggactcaagggaagaggaagctgg[G/T]agtccgatgtccagcacagcaaga
- ASB in cell types
- 22RV1 (prostate carcinoma) MCF7 (Invasive ductal breast carcinoma) GM12878 (female B-cells lymphoblastoid cell line)
- ASB for transcription factors
- ANDR_HUMAN FOXK2_HUMAN ZFX_HUMAN
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-log10 FDR of Ref (G) ASB
-log10 FDR of Alt (T) ASB
Details
Transcription factors
Cell types
Uniprot ID | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | Motif fold change | Motif concordance | |
|---|---|---|---|---|---|---|---|---|
| ANDR_HUMAN | 2.22 | -1.22 | 2.00 | n/a | No Hit | |||
| FOXK2_HUMAN | 2.40 | -4.34 | 1.50 | n/a | n/a | |||
| ZFX_HUMAN | -2.41 | 2.29 | 1.00 | n/a | No Hit |
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Motif analysis
No data available
Genetic associations
GTEx eQTL Brain_Cerebellar_Hemisphere, Brain_Cerebellum, Esophagus_Mucosa, Skin_Sun_Exposed_Lower_leg, Testis