rs5919184 chrX:66728789 T>C
- Sequence
atcttatgggactatcatcatata[T/C]gtggtccatcattgacatcattga
- ASB in cell types
- GM18505 (female B-cells Lymphoblastoid Cell Lines)
- ASB for transcription factors
- STAG1_HUMAN CTCF_HUMAN RAD21_HUMAN
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-log10 FDR of Ref (T) ASB
-log10 FDR of Alt (C) ASB
Details
Transcription factors
Cell types
Uniprot ID | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | Motif fold change | Motif concordance | |
|---|---|---|---|---|---|---|---|---|
| STAG1_HUMAN | n/a | 3.19 | 1.50 | n/a | n/a | |||
| CTCF_HUMAN | 0.59 | 1.91 | 1.83 | n/a | No Hit | |||
| RAD21_HUMAN | n/a | 2.48 | 2.00 | n/a | n/a |
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Motif analysis
No data available
Genetic associations
GTEx eQTL Artery_Tibial, Brain_Frontal_Cortex_BA9, Cells_Cultured_fibroblasts, Colon_Sigmoid, Esophagus_Gastroesophageal_Junction, Thyroid