rs5925605 chrX:23743269 C>G
- Sequence
ccttgctgaggacagcccgggagc[C/G]ggacagcggtgtccgggggcggga
- ASB in cell types
- CD14+ monocytes HEK293 (embryonic kidney) monocytes from periferal blood GM12878 (female B-cells lymphoblastoid cell line)
- ASB for transcription factors
- STAT1_HUMAN SRBP2_HUMAN ZN189_HUMAN BRD4_HUMAN
View in PheLiGe Color scale
-log10 FDR of Ref (C) ASB
-log10 FDR of Alt (G) ASB
Details
Transcription factors
Cell types
Uniprot ID | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | Motif fold change | Motif concordance | |
|---|---|---|---|---|---|---|---|---|
| STAT1_HUMAN | 2.73 | -1.19 | 2.00 | n/a | No Hit | |||
| SRBP2_HUMAN | 1.74 | -1.19 | 2.00 | n/a | No Hit | |||
| ZN189_HUMAN | 2.82 | -5.34 | 2.00 | n/a | n/a | |||
| BRD4_HUMAN | 1.86 | -0.79 | 2.00 | n/a | n/a |
Items per page:
1 – 4 of 4
Motif analysis
No data available
Genetic associations
GTEx eQTL Cells_EBV-transformed_lymphocytes, Muscle_Skeletal, Pituitary, Skin_Not_Sun_Exposed_Suprapubic, Skin_Sun_Exposed_Lower_leg, Whole_Blood