rs59359988 chr16:4958789 G>A

Sequence
ggaaacctgcgtgtgtacatgtgt[G/A]tgatagagacagtgcctgtgaaat
ASB in cell types
T47D (invasive ductal carcinoma)
ASB for transcription factors
HIF1A_HUMAN HIF3A_HUMAN

Color scale

color scale ref
-log10 FDR of Ref (G) ASB
color scale alt
-log10 FDR of Alt (A) ASB

Details

Uniprot ID
Effect size Ref
Effect size Alt
FDR Ref
FDR Alt
Mean BAD
Motif fold change
Motif concordance
HIF1A_HUMAN -5.36 3.18 1.004.3·10-3 2.00 n/a No Hit
HIF3A_HUMAN -1.72 2.77 1.000.02 2.00 n/a n/a
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Motif analysis

No data available

Genetic associations

GTEx eQTL Brain_Cortex Brain_Putamen_basal_ganglia Thyroid

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