rs59380452 chr1:9436587 A>G
- Sequence
tgccaggcacagtggctcacacct[A/G]taatcccagcactttgggaggtgg
- ASB in cell types
- LNCaP (prostate carcinoma) 22RV1 (prostate carcinoma)
- ASB for transcription factors
- ANDR_HUMAN HNF4G_HUMAN MTOR_HUMAN
View in PheLiGe Color scale
-log10 FDR of Ref (A) ASB
-log10 FDR of Alt (G) ASB
Details
Transcription factors
Cell types
Uniprot ID | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | Motif fold change | Motif concordance | |
|---|---|---|---|---|---|---|---|---|
| ANDR_HUMAN | 1.38 | 0.72 | 1.41 | n/a | No Hit | |||
| HNF4G_HUMAN | 1.91 | -3.19 | 1.50 | n/a | No Hit | |||
| MTOR_HUMAN | 1.83 | -1.54 | 1.00 | n/a | n/a |
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