rs595595 chr1:234314162 G>A
- Sequence
tggaggaggagatcagagtccccc[G/A]cctgcctgtcagaatgaactgatg
- ASB in cell types
- HepG2 (hepatoblastoma) liver
- ASB for transcription factors
- HNF4A_HUMAN SKI_HUMAN FOXK2_HUMAN FOXP1_HUMAN
View in PheLiGe Color scale
-log10 FDR of Ref (G) ASB
-log10 FDR of Alt (A) ASB
Details
Transcription factors
Cell types
Uniprot ID | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | Motif fold change | Motif concordance | |
|---|---|---|---|---|---|---|---|---|
| HNF4A_HUMAN | 2.13 | -0.53 | 1.00 | n/a | No Hit | |||
| SKI_HUMAN | 2.69 | -2.43 | 1.00 | n/a | n/a | |||
| FOXK2_HUMAN | 2.26 | -2.12 | 1.25 | n/a | n/a | |||
| FOXP1_HUMAN | 2.06 | -0.60 | 1.25 | n/a | No Hit | |||
| TCF7_HUMAN | 2.41 | -2.01 | 1.00 | n/a | No Hit |
Items per page:
1 – 5 of 5