rs5973870 chrX:108399627 A>G
- Sequence
gttcttttcaacacacaaaatgct[A/G]gggctggaaggaagatgagacacc
- ASB in cell types
- MCF10A (breast epithelial cells) embryonic kidney
- ASB for transcription factors
- NCOA3_HUMAN GCR_HUMAN TEAD4_HUMAN
View in PheLiGe Color scale
-log10 FDR of Ref (A) ASB
-log10 FDR of Alt (G) ASB
Details
Transcription factors
Cell types
Uniprot ID | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | Motif fold change | Motif concordance | |
|---|---|---|---|---|---|---|---|---|
| NCOA3_HUMAN | -2.72 | 3.10 | 1.00 | n/a | n/a | |||
| GCR_HUMAN | n/a | 2.69 | 2.00 | n/a | No Hit | |||
| TEAD4_HUMAN | n/a | 2.59 | 1.00 | n/a | No Hit |
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Motif analysis
No data available
Genetic associations
GTEx eQTL Cells_Cultured_fibroblasts, Esophagus_Mucosa, Pancreas, Skin_Not_Sun_Exposed_Suprapubic, Skin_Sun_Exposed_Lower_leg, Testis