rs5992096 chr22:17706530 T>C
- Sequence
ttctctgtctcacaaaaataatga[T/C]gtgaaagtgttttgtgaaaatgtc
- ASB in cell types
- GM12878 (female B-cells lymphoblastoid cell line)
- ASB for transcription factors
- IKZF2_HUMAN TBX21_HUMAN SKIL_HUMAN IKZF1_HUMAN
View in PheLiGe Color scale
-log10 FDR of Ref (T) ASB
-log10 FDR of Alt (C) ASB
Details
Transcription factors
Cell types
Uniprot ID | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | Motif fold change | Motif concordance | |
|---|---|---|---|---|---|---|---|---|
| IKZF2_HUMAN | 1.34 | -0.94 | 1.00 | n/a | n/a | |||
| TBX21_HUMAN | 1.25 | -0.44 | 1.00 | n/a | No Hit | |||
| SKIL_HUMAN | 2.20 | -1.96 | 1.00 | n/a | n/a | |||
| IKZF1_HUMAN | 0.84 | -0.82 | 1.25 | n/a | No Hit | |||
| BACH1_HUMAN | 2.67 | -2.54 | 1.00 | n/a | No Hit |
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