rs5992442 chr22:19613438 A>G
- Sequence
cgttctgtttccagtttgtgaatt[A/G]ccagttcctgttttcccccttttc
- ASB in cell types
- GM12878 (female B-cells lymphoblastoid cell line) K562 (myelogenous leukemia) CTV-1 (Adult T acute lymphoblastic leukemia)
- ASB for transcription factors
- IKZF1_HUMAN IKZF2_HUMAN SPI1_HUMAN
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-log10 FDR of Ref (A) ASB
-log10 FDR of Alt (G) ASB
Details
Transcription factors
Cell types
Uniprot ID | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | Motif fold change | Motif concordance | |
|---|---|---|---|---|---|---|---|---|
| IKZF1_HUMAN | 1.94 | -0.96 | 2.00 | n/a | No Hit | |||
| IKZF2_HUMAN | 1.82 | -0.39 | 1.00 | n/a | n/a | |||
| SPI1_HUMAN | 0.69 | 0.89 | 1.59 | 0.36 | Weak Concordant |
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Motif analysis
