rs59940266 chr19:57191556 G>A
- Sequence
gtagccactgagggccccggtcgg[G/A]gccgctttgcaggtccctagtcag
- ASB in cell types
- 22RV1 (prostate carcinoma)
- ASB for transcription factors
- JUN_HUMAN ANDR_HUMAN
View in PheLiGe Color scale
-log10 FDR of Ref (G) ASB
-log10 FDR of Alt (A) ASB
Details
Transcription factors
Cell types
Uniprot ID | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | Motif fold change | Motif concordance | |
|---|---|---|---|---|---|---|---|---|
| JUN_HUMAN | 1.12 | 0.26 | 1.53 | n/a | No Hit | |||
| ANDR_HUMAN | 2.23 | 0.17 | 1.67 | n/a | No Hit |
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Motif analysis
No data available
Genetic associations
GTEx eQTL Artery_Aorta, Artery_Tibial, Cells_EBV-transformed_lymphocytes, Colon_Transverse, Muscle_Skeletal, Skin_Sun_Exposed_Lower_leg, Testis, Thyroid