rs5995261 chr22:36221928 G>C
- Sequence
ttagcgttcaggctgagagggagg[G/C]ggaacaacagtgaaactccccacg
- ASB in cell types
- HEK293 (embryonic kidney) erythroid cells bipolar neuron CD14+ monocytes
- ASB for transcription factors
- CTCF_HUMAN STAG1_HUMAN STAT1_HUMAN
View in PheLiGe Color scale
-log10 FDR of Ref (G) ASB
-log10 FDR of Alt (C) ASB
Details
Transcription factors
Cell types
Uniprot ID | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | Motif fold change | Motif concordance | |
|---|---|---|---|---|---|---|---|---|
| CTCF_HUMAN | 0.99 | 1.11 | 1.29 | n/a | No Hit | |||
| STAG1_HUMAN | -0.48 | 0.92 | 1.04 | n/a | n/a | |||
| STAT1_HUMAN | 1.97 | -0.20 | 2.00 | n/a | No Hit |
Items per page:
1 – 3 of 3
Motif analysis
No data available
Genetic associations
GTEx eQTL Adipose_Subcutaneous, Adipose_Visceral_Omentum, Artery_Aorta, Artery_Tibial, Colon_Sigmoid, Esophagus_Mucosa, Esophagus_Muscularis, Nerve_Tibial, Thyroid