rs6000840 chr22:37608637 G>A
- Sequence
acttcctctcccgcctgagcgccg[G/A]gaacggaaaagcaggcggccggtc
- ASB in cell types
- naive IgD+ B cells thymus-derived CD34- cells esophagus squamous epithelium MOLM14 (Adult acute myeloid leukemia)
- ASB for transcription factors
- BC11B_HUMAN FOXP1_HUMAN
View in PheLiGe Color scale
-log10 FDR of Ref (G) ASB
-log10 FDR of Alt (A) ASB
Details
Transcription factors
Cell types
Uniprot ID | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | Motif fold change | Motif concordance | |
|---|---|---|---|---|---|---|---|---|
| BC11B_HUMAN | 2.62 | n/a | 2.50 | n/a | n/a | |||
| FOXP1_HUMAN | 2.05 | n/a | 2.00 | n/a | No Hit |
Items per page:
1 – 2 of 2
Motif analysis
No data available
Genetic associations
GTEx eQTL Adipose_Subcutaneous, Adipose_Visceral_Omentum, Artery_Aorta, Artery_Tibial, Cells_Cultured_fibroblasts, Colon_Sigmoid, Esophagus_Gastroesophageal_Junction, Esophagus_Muscularis, Heart_Atrial_Appendage, Lung, Nerve_Tibial, Pancreas, Prostate, Skin_Not_Sun_Exposed_Suprapubic, Skin_Sun_Exposed_Lower_leg, Thyroid, Uterus, Whole_Blood